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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs1808308 chr7:76138967 C/G 2.35E-5 113 40.67 45.87 25.83 KM Plot
THYM rs181370034 chr19:58917198 G/A 0.000113 110 38.13 49.83 37.13 KM Plot
THYM rs185161330 chr19:58916579 C/T 0.000123 108 38.23 50.07 37.13 KM Plot
THYM rs1861104 chr7:76138845 T/C 2.35E-5 113 40.67 45.87 25.83 KM Plot
THYM rs1861105 chr7:76138835 C/T 2.35E-5 113 40.67 45.87 25.83 KM Plot
THYM rs1862450 chr16:24856775 A/G 3.99E-5 113 50.1 27.33 44.3 KM Plot
THYM rs189919 chr16:24737741 G/A 4.25E-8 110 25.12 27.33 46.07 KM Plot
THYM rs199992309 chr8:82689546 G/GAA 8.96E-5 110 41.77 41.33 22.5 KM Plot
THYM rs200187161 chr2:32979166 AAAAT/A 8.22E-13 113 48 26.57 0.9 KM Plot
THYM rs200526 chr16:24760511 C/T 3.63E-8 112 25.12 30.03 46.6 KM Plot
THYM rs200528 chr16:24759131 A/G 3.63E-8 112 25.12 30.03 46.6 KM Plot
THYM rs200531 chr16:24756172 G/A 3.63E-8 112 25.12 30.03 46.6 KM Plot
THYM rs200537 chr16:24747787 G/C 3.63E-8 112 25.12 30.03 46.6 KM Plot
THYM rs200541 chr16:24733141 A/G 4.25E-8 110 25.12 27.33 46.07 KM Plot
THYM rs200663331 chr8:82685526 C/T 7.04E-5 112 42.25 36.4 22.5 KM Plot